I've finished my first metagenome assembly and would like to know if there is a good ORF finder I could try out before proceeding to functional annotation with CAMERA for example.
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Thank you, I also found out CAMERA has an ORF finder as well.Comment
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vanillasky...are you mining assemblies for specific genes/enzymes?
i'm trying to figure out a more automated way of picking out ORFs that relate to specific enzyme families.Comment
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Hi Lac302! Maybe you can clarify what you mean by mining assemblies? I am interested in annotating the contigs coming out of my assembled metagenomes. Ultimately, yes I would like to focus on those contigs containing genes related to a certain function.Comment
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