novoalign GLIBC error

[yasu]

Hi,

I am going to use novoalign for PE reads and I got the following error message:

$ novoalign -f s_1_1_.fq s_1_2_.fq -d hg19
novoalign: /lib64/libc.so.6: version `GLIBC_2.7' not found (required by novoalign)

I did
$ strings /lib64/tls/libc.so.6 | grep GLIBC
GLIBC_2.2.5
GLIBC_2.2.6
GLIBC_2.3
GLIBC_2.3.2
GLIBC_2.3.3
GLIBC_2.3.4
GLIBC_2.4
GLIBC_2.5
GLIBC_PRIVATE

and I also tried to update of glibc
$ yum update glibc
but I got the following message 'No Packages marked for Update'.

I used CentOS5.4_x86_64/

Any suggestions to fix this problem?
Thanks a lot!

[sparks]

Novoalign GLIBC Error

Hi Yasu,

On down;load page there is a static linked version of Novoalign that should avoid this problem.

Colin

[yasu]

Hi Colin,
Thanks for your quick response!!
It works well!!
-Yasu