dbSNP XML file to CSV conversion

[tushardave]

Hello Folks,

I would like to get inputs from you guys regarding dbSNP XML file conversion. I would like to convert the XML file to CSV file. I have tried several online XML to CSV conversion tool but did not get success. Please provide your thoughts on the same. Is there any way that I can find dbSNP data in CSV/TXT format?

Thanks.

[larsgt]

Use annovar

Hello Folks,

I would like to get inputs from you guys regarding dbSNP XML file conversion. I would like to convert the XML file to CSV file. I have tried several online XML to CSV conversion tool but did not get success. Please provide your thoughts on the same. Is there any way that I can find dbSNP data in CSV/TXT format?

Thanks.

I don't know if it's what you need. But one option is just to use the converted files you can get with Annovar.

[lindenb]

You could use the following example I posted biostars: " How To Get A Dbsnp Data From Java?" https://www.biostars.org/p/95284/