My question is basic and as follows:
I have 1000 transcription factors (TFs) which I have retrieved their amino acid sequences from Uniprot. I want to extract the DNA binding domain(s) for each of them (start positin, end position..etc). How can I do that?
I heard of pfam but I am wondering if I need to submit each of the TFs or there is an automatic way to submit all of them and parse outputs? any other tools that give me more options?
I have 1000 transcription factors (TFs) which I have retrieved their amino acid sequences from Uniprot. I want to extract the DNA binding domain(s) for each of them (start positin, end position..etc). How can I do that?
I heard of pfam but I am wondering if I need to submit each of the TFs or there is an automatic way to submit all of them and parse outputs? any other tools that give me more options?
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