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  • maubp
    replied
    blobplots? https://github.com/blaxterlab/blobology

    Leave a comment:


  • Gorbenzer
    replied
    up! anyone have suggestions?

    Leave a comment:


  • Gorbenzer
    started a topic metagenomics contigs taxonomy assignment

    metagenomics contigs taxonomy assignment

    Hi everyone,
    i'm doing metagenomic assemblies of environmental samples rich in one species (>50% of the bacterial content is coming from a single species).

    I got a good amount of contigs using Abyss (but if anyone have good suggestions i'll try other softwares) and i'll like to taxonomically assign my contigs in order to identify the contigs related to the high abundant species and analyze his gene content.

    Can anyone suggest a good software for this purpose? I've found different tools for taxonomic assignment of single reads but not much for assembled contigs.

    Thanks to anyone that will help

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  • seqadmin
    Recent Advances in Sequencing Analysis Tools
    by seqadmin


    The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
    05-06-2024, 07:48 AM

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