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bioinfobeginner

Junior Member

Join Date: Jul 2014

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Metavelvet

07-30-2014, 08:22 AM

Hi All,
I am running metavelvet and I am confused with the kmer length I should provide in velveth. I have a Ion proton data with average length of 120 and min 9 and max 416.
And will these lengths will be short or long, the option we have to provide in velveth command.

Thanks!
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