R - package sRAP - SEQanswers

IsBeth

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Join Date: Nov 2013

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R - package sRAP

09-23-2014, 03:59 AM

Hello! I'm trying out the sRAP package for R. I thought it would be very easy to implement but I get an error with the RNA.norm function when I try to use my own data:

expression.mat <- RNA.norm(expression.table, project.name, project.folder)

Error in `[.data.frame`(input.table, , 2:ncol(input.table)) :
undefined columns selected

My data have got replicates, so the raw data table looks like this:

-------repl1 repl2
gene1
gene2
...

I guess I'm doing something wrong XD What could be the reason for this?

Last edited by IsBeth; 09-23-2014, 04:02 AM.
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