I'm analyzing antibodies and I'm using IGBlastn standalone for it. I have created my own database using makeblastdb. When running it gives the error Segmentation fault (core dumped). Does anyone know how to fix this?
thanks
thanks
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how to create your own database using makeblastdb by IGblastn
there are too many parameters in igblast ,so I am not sure the way to make a database for igblast ,I have downloaded the all of IGHV,D,J, TRB,D,A,G from IMGT ,
-germline_db_V database/mouse_gl_V
-germline_db_J database/mouse_gl_J
-germline_db_D database/mouse_gl_D
-organism mouse
-domain_system imgt
-ig_seqtype Ig
-query $id
-auxiliary_data
optional_file/mouse_gl.aux
-show_translation -outfmt 7
-out $id.blast_result
-num_threads 13
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The immune system’s power comes from its genetic diversity, allowing myriad threats to be neutralized through first recognizing foreign antigens. That diversity is also what makes the immune system so difficult to study. Recent advances in sequencing technology and computational biology, however, are giving researchers new tools to understand immune responses and immune-related diseases in greater detail.
This convergence of genetics, immunology, and computation...09-01-2026, 05:41 AM
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