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  • xplorgenes
    Junior Member
    • May 2010
    • 1

    #1

    resuming stopped process due to error.

    hi all,
    I was running 4 assembly process during the weekend using mira. today i just saw that all the processes were stopped due to insufficient space on disk. The error "No space left on device" is why the process stopped. how do i resume this process from where it started showing error? the folder contains 65000 fasta formatted text files and the assembly was automated to take each text file as input at a time. each file creates one assembly folder and one log file.
    plz help.
    thank you.
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    I don't know if Bastien reads these forums - I'd ask on the MIRA talk mailing list if I were you.

    Comment

    • BaCh
      Member
      • May 2008
      • 81

      #3
      Originally posted by maubp View Post
      I don't know if Bastien reads these forums - I'd ask on the MIRA talk mailing list if I were you.
      http://www.chevreux.org/mira_mailinglists.html
      I do, but way less frequently than I'd wish for. Unfortunately the day has only 24 hours and then there's sleep to account for

      Back to the original question: you currently cannot resume an aborted MIRA assembly. This is a feature I started implementing but haven't got through yet, sorry.

      B.

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