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  • mmmm
    Senior Member
    • Jul 2013
    • 131

    #1

    extract genes in mauve

    how to identify genes that are missing from the whole genome of strain1 but present in strain2-

    I am using progressive mauve for alignment (including annotated reference genome with strains 1, 2) but how to get these information?
  • bio_informatics
    Senior Member
    • Nov 2013
    • 182

    #2
    Navigate to export in tool bar, from there you can get SNP information.
    Bioinformaticscally calm

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    • mmmm
      Senior Member
      • Jul 2013
      • 131

      #3
      thanks- but I am not asking about SNPs- I am asking about GENES (or regions that present in one strain and absent from another)

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