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  • exon #

    Is there a script that can get the exon # of each probe in a file.

    For example, in the attached file the probe id, location, and gene name are all listed. What I would like to do is for each put an exon # or intron beside it.

    So,
    Probe ID Chromosome Location Gene Score
    A_16_P00686497 chr3:38531418-38531462 ACVR2B 0.4704 Exon xx
    A_16_P00885156 chr3:183092118-183092174 MCF2L2 0.8601 Exon xx
    A_16_P18683539 chr9:90184449-90184508 DAPK1 0.9573 Intron
    A_16_P17108812 chr5:45264657-45264716 HCN1 0.9168 Intron

    Thanks .
    Attached Files

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