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  • etui
    Junior Member
    • Mar 2012
    • 1
    #1

    fastPhase multi allelic loci

    Hi all,

    I try to use fastPhase for Linux (v 1.4.0) but I got the error message: 'problem with input: ind 4, locus 1 perhaps more than two allelic types encountered'.
    I'm wondering if fastPhase can handle multi allelic loci? Should I split the data into populations? Or any suggestions how I can handle these data?

    Best,
    etui
    -----------------------
    The input file is:
    Code:
    9
19
# Strain1
3311344424131211443
3311344424131211443
# Strain2
2311344424131211443
2111344424131211443
# Strain3
2311144424131211441
2311144424131211441
# Strain4
4311144424131211441
4311144424131211441
# Strain5
2111344424131211441
4111344424131211441
# Strain6
2311344444131211441
2111344444131211441
# Strain7
2111344424131211441
2311344424131211441
# Strain8
2311144424131211441
2111144424131211441
# Strain9
2111344424131211441
2311344424131211441
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