Understanding output SOAPdenovo trans
Hello!
I just ran SOAPdenovo trans with my data but I got a bunch of files as output. Most of them are explained on SOAPdenovo trans webpage but some are not. Can anybody tell me what are these files
*.agp
*.ctg2Read (I got a really huge file 36Gb)
If you know of some website that has a more detailed explanation of the outputfiles please share
!
My data consists around 700 million paired reads. This is the command I used
/naslx/projects/uj502/di29kiz/SOAP/SOAPdenovo-Trans-31mer all -K 29 -s /naslx/projects/uj502/di29kiz/SOAP/config_file -o kmer39 -p 8
Thank you for your time
Cheers
I just ran SOAPdenovo trans with my data but I got a bunch of files as output. Most of them are explained on SOAPdenovo trans webpage but some are not. Can anybody tell me what are these files
*.agp
*.ctg2Read (I got a really huge file 36Gb)
If you know of some website that has a more detailed explanation of the outputfiles please share
!My data consists around 700 million paired reads. This is the command I used
/naslx/projects/uj502/di29kiz/SOAP/SOAPdenovo-Trans-31mer all -K 29 -s /naslx/projects/uj502/di29kiz/SOAP/config_file -o kmer39 -p 8
Thank you for your time
Cheers
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