Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • angeloulivieri
    Member
    • Jul 2012
    • 30

    #1

    How to get a Pathway map from a given transcriptome annotation

    Hi all,
    I have a complete transcriptome annotation performed with blast and got the UniPathways associated with the SwissProt ids.
    Now I wanted to generate the most important pathways maps of the transcriptome. Do exist some tool to do this that I can download and execute on my machine? I also would like to get a graphical result not only data files like xgml.

    Thanks you all

    Angelo
  • sadiexiaoyu
    Member
    • Apr 2013
    • 57

    #2
    Hi, angeloulivieri,

    I am also interested in it!

    May I ask have you already got the information?

    Thanks!

    Best,

    Sadiexiaoyu

    Comment

    Latest Articles

    Collapse

    • kinpict.com
      Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
      by kinpict.com
      The part about this topic feels surprisingly grounded, and the details on the page is the bit that made me slow down. I’d keep <a href="https://kinpict.com/">ai family photo generator</a> bookmarked for later.
      Today, 06:37 PM
    • SEQadmin2
      16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
      by SEQadmin2





      NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
      10-30-2026, 06:46 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by SEQadmin2, 11-12-2026, 07:59 AM
    0 responses
    27 views
    0 reactions
    Last Post SEQadmin2  
    Started by SEQadmin2, 11-05-2026, 09:25 AM
    0 responses
    35 views
    0 reactions
    Last Post SEQadmin2  
    Started by SEQadmin2, 11-03-2026, 11:54 AM
    2 responses
    56 views
    0 reactions
    Last Post kinpict.com  
    Started by SEQadmin2, 10-28-2026, 09:57 AM
    0 responses
    175 views
    0 reactions
    Last Post SEQadmin2  
    Working...