BWA installation failure

[chrisW]

similar install problems

Greetings, I am novice as novice can be. I have a rudimentary knowledge of things UNIX, so understanding the error messages is currently difficult. I had a similar error wrt -m64. I removed that from the CFLAGS line and now have different errors. To whit:

Error code 127, which follows immediately after 2 lines that start "gcc" and two lines that appear to be instructing some change to

ar -cru libbwtgen.a bwt_gen.o QSufSort.o

and then the following Stop messages:

Stop in .../bwa-0.5.7/bwt_gen (line 18 of Makefile) Error code 1

Stop in..../bwa-0.5.7 (line 33 of Makefile)

Any help would be much appreciated!

[Jurek]

It worked. Thank you!

[lh3]

Remove -m64 from the "CFLAGS" line in Makefile. Nonetheless, bwa works better on 64-bit machines.

[Jurek]

Hello World,

I downloaded the bwa version 5.7 and cannot compile it.

[Jurek@fg-pc22 bwa-0.5.7]$ make
make[1]: Entering directory `/home/Jurek/Desktop/bwa2/bwa-0.5.7'
make[1]: Nothing to be done for `lib'.
make[1]: Leaving directory `/home/Jurek/Desktop/bwa2/bwa-0.5.7'
make[1]: Entering directory `/home/Jurek/Desktop/bwa2/bwa-0.5.7/bwt_gen'
gcc -c -g -Wall -O2 -m64 -DHAVE_PTHREAD bwt_gen.c -o bwt_gen.o
bwt_gen.c:1: sorry, unimplemented: 64-bit mode not compiled in
make[1]: *** [bwt_gen.o] Error 1
make[1]: Leaving directory `/home/Jurek/Desktop/bwa2/bwa-0.5.7/bwt_gen'
make: *** [lib-recur] Error 1

What am I doing wrong (I appreciate it may be very simple)?