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  • Ganesh Ujwal
    Member
    • Dec 2014
    • 16

    #1

    How to do an alanine scan using Rosetta?

    I have a complex of two proteins interacting.

    I define their interface of interaction as the set of residues that are less than 5 Angstroms from each other. I want to do an alanine scan on one of the proteins, on the set of residues at the interface.

    How can I do this using Rosetta (or PyRosetta)?

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