Hi, i am trying to import my existing RNAseq analysis tools to mac. Everything went well but RNA-SeQC.
RNA-SeQC would just hang after "Running IntronicExpressionReadBlock Walker ...." without throw out an error message.
I use exactly the same genome reference files and bam files on both unix and mac so file format wouldn't be an issue.
I got the same error on both RNA-SeQCv1.1.7 and RNA-SeQCv1.1.8 and also on OSX 10.9 and OSX 10.7
Since I am not getting any error message so it is difficult for me to figure out what could be issue. Anybody has similar experience or any suggestions?
Thanks
RNA-SeQC would just hang after "Running IntronicExpressionReadBlock Walker ...." without throw out an error message.
I use exactly the same genome reference files and bam files on both unix and mac so file format wouldn't be an issue.
I got the same error on both RNA-SeQCv1.1.7 and RNA-SeQCv1.1.8 and also on OSX 10.9 and OSX 10.7
Since I am not getting any error message so it is difficult for me to figure out what could be issue. Anybody has similar experience or any suggestions?
Thanks
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