Hello, everyone,
There is one question about somatic mutation detection, is there anyone could help me?
Duplicated reads may be marked by Picard in bam-files, and most software don't care this tag. When we calculate CNVs, we shouldn't use duplicated reads, How about Somatic SNVs or InDels?
There is one question about somatic mutation detection, is there anyone could help me?
Duplicated reads may be marked by Picard in bam-files, and most software don't care this tag. When we calculate CNVs, we shouldn't use duplicated reads, How about Somatic SNVs or InDels?
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