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  • satishkumar
    Junior Member
    • Nov 2010
    • 8

    #1

    how is ABQ - Average quality of variant-supporting bases calculated in the Varscan?

    How is ABQ - Average quality of variant-supporting bases calculated using Varscan? And also Can anyone tell me what is the scale( phred ??) of the ABQ score?

    Thanks,
    Satish

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