build hg38 in CEAS
Hi guys,
I tried to build hg38 in CEAS using command:
$ build_genomeBG -d hg38 -g refGene -w hg38.wig -o hg38.refGene
I made this hg38.wig and it looked like:
track type=wiggle_0
fixedStep chrom=chr1 start=1 step=248956422
1
fixedStep chrom=chr2 start=1 step=242193529
1
......
It seemed good, and the annotation table was successfully created.
But when I ran ceas:
$ ceas -g hg38.refGene -b Bio.bedgraph
A graph was generated, with no information about the genome (all showing bar value of 0), while the intervals in my bed seemed to be allocated into each category in a reasonable way.
Solutions?
I tried to build hg38 in CEAS using command:
$ build_genomeBG -d hg38 -g refGene -w hg38.wig -o hg38.refGene
I made this hg38.wig and it looked like:
track type=wiggle_0
fixedStep chrom=chr1 start=1 step=248956422
1
fixedStep chrom=chr2 start=1 step=242193529
1
......
It seemed good, and the annotation table was successfully created.
But when I ran ceas:
$ ceas -g hg38.refGene -b Bio.bedgraph
A graph was generated, with no information about the genome (all showing bar value of 0), while the intervals in my bed seemed to be allocated into each category in a reasonable way.
Solutions?