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  • Pol8
    Member
    • Aug 2014
    • 33

    sRNAs assembling

    Hi,

    which program(s) do you suggest to use for de novo assembling of sRNA reads 18-25 nt in lenght?

    Thanks
  • dpryan
    Devon Ryan
    • Jul 2011
    • 3478

    #2
    None, there's nothing to assemble. Just trim the adapters off of your reads and possibly cluster them with something like cd-hit-est.

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