Hi there,
I am very new to MUMmer/NUCmer. When I am trying to run NUCmer I am getting following error. I am using multi fasta query/ref files.
Usage: NUCmer <ref> <query>
Error message:
1: PREPARING DATA
2,3: RUNNING mummer AND CREATING CLUSTERS
# reading input file "out.ntref" of length 521077706
# construct suffix tree for sequence of length 521077706
# (maximum reference length is 536870908)
# (maximum query length is 4294967295)
# process 5210777 characters per dot
#.......................................................................ERROR: mummer and/or mgaps returned non-zero
Can you let me know why I am getting this error?? And what should I do?
Thanks
Neha
I am very new to MUMmer/NUCmer. When I am trying to run NUCmer I am getting following error. I am using multi fasta query/ref files.
Usage: NUCmer <ref> <query>
Error message:
1: PREPARING DATA
2,3: RUNNING mummer AND CREATING CLUSTERS
# reading input file "out.ntref" of length 521077706
# construct suffix tree for sequence of length 521077706
# (maximum reference length is 536870908)
# (maximum query length is 4294967295)
# process 5210777 characters per dot
#.......................................................................ERROR: mummer and/or mgaps returned non-zero
Can you let me know why I am getting this error?? And what should I do?
Thanks
Neha
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