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  • sandesh
    Member
    • Jun 2013
    • 17

    #1

    Bowtie2: direct stderr to a file

    Hello All,

    How can I direct bowtie2 alignment report (stderr) to a file instead of console?

    Thanks
    Sandesh
  • Brian Bushnell
    Super Moderator
    • Jan 2014
    • 2709

    #2
    Code:
    command 2> file.txt
    1> does stdout, 2> does stderr.

    Comment

    • sandesh
      Member
      • Jun 2013
      • 17

      #3
      Originally posted by Brian Bushnell View Post
      Code:
      command 2> file.txt
      1> does stdout, 2> does stderr.

      Thanks It works

      Comment

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