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I do not think they got an error. When I run the code I get back the qcovs value and its a number value. I think that they are asking for the hsp_middleline value that shows where the protein and matches and doesn't. The only way I know how to get that is in the xml format and then you either have to cut and paste it from there or have a scritp to extract it from the file. Which is out of m relm of ability, Maybe GenoMax knows how to do that from the standalone BLAST but I have not done it before, other then just using the xml format option.
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by seqadmin
The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...-
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04-22-2024, 07:01 AM -
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by seqadmin
Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...-
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04-04-2024, 04:25 PM -
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