Was there an error? Post that.
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I do not think they got an error. When I run the code I get back the qcovs value and its a number value. I think that they are asking for the hsp_middleline value that shows where the protein and matches and doesn't. The only way I know how to get that is in the xml format and then you either have to cut and paste it from there or have a scritp to extract it from the file. Which is out of m relm of ability, Maybe GenoMax knows how to do that from the standalone BLAST but I have not done it before, other then just using the xml format option.
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by SEQadmin2
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
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