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  • tindinh
    Junior Member
    • Mar 2015
    • 8
    #1

    CNV and SNP calling

    Hi,

    I would like to call CNVs and SNPs of a series of genes (about 2000 genes) from a collection of samples of yeast strain genomes. I am using CNVrd2 but it can only help to do the analysis for one gene at a time. Can you suggest me a package that can be useful for it? Thank you so much!

    I have got SAM, BAM of the genomes gff files of reference genome.
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