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  • JAD
    Junior Member
    • Mar 2015
    • 2

    #1

    Mapping NM ids to transcripts and annotation

    I have two related questions:

    1) I have many clients who say "I want to see [gene] var 2" but in TargetScan you only have NM identifiers. Where is a good place to get a map between these "common names" and the NM ids?
    2) If I have a transcript (NM identifier) and I want to get the fasta sequence labeled with the promoter, the exons, primer sites, slice sites, etc, where would that be available? You can find this information in UCSC but not in a "one-stop-shop" kind of way. Used to be in Tess.

    Thanks!

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