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  • yxibcm
    Junior Member
    • Jun 2010
    • 6
    #1

    SOAP2 error: length y < 0, countinue as 13

    Hi, I'm using SOAP2 to align some short reads (20nt) but got the following error:

    length y < 0, countinue as 13

    Does anyone know what does this mean and can I change the parameter settings to avoid it? currently I'm using the default parameters.

    Thanks,

    YX
    Tags: None
    • Chen Rui
      Junior Member
      • Oct 2009
      • 4
      #2
      up!

      I met the same problem when query reads was less than 27 nt.

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