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  • sra to fastq

    Hi,

    I try to convert SRR940323.sra to fastq format.

    li@li-Lenovo:~$ fastq-dump -A SRR940323.sra
    2015-04-15T07:16:34 fastq-dump.2.1.7 err: data bad version while constructing page map within virtual database module - failed SRR940323.sra
    Written 0 spots total


    What's wrong?

    Thanks.


    Li

  • #2
    try: fastq-dump SRR940323.sra
    If it does not work, try a newer version of fastq-dump.

    Comment


    • #3
      Originally posted by yueli View Post
      Hi,

      I try to convert SRR940323.sra to fastq format.

      li@li-Lenovo:~$ fastq-dump -A SRR940323.sra
      2015-04-15T07:16:34 fastq-dump.2.1.7 err: data bad version while constructing page map within virtual database module - failed SRR940323.sra
      Written 0 spots total

      What's wrong?

      Thanks.

      Li
      Have you done this: http://seqanswers.com/forums/showpos...36&postcount=7

      Comment

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