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  • mavershang
    Junior Member
    • Sep 2014
    • 9

    #1

    How to add CADD score to variant annotation using dbNSFP

    Hi there,

    I want to add CADD for the variant annotation, and easily directed to dbNSFP. According to its official site (https://sites.google.com/site/jpopgen/dbNSFP), dbNSFP has integrated CADD.

    But when I run snpSift using dbNSFP, CADD is not in the output (while others like SIFT, Polyphen have no problem to be output).

    Any suggestion?

    Thanks in advance!
  • lindenb
    Senior Member
    • Apr 2010
    • 143

    #2
    cross-posted https://www.biostars.org/p/141989/

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