CLC homozygous reference calls

[Api3]

Hi all,

I'm stuck with the CLC genomics workbench and I was wondering if anyone could help me.

I'm using CLC to do a SNP analysis. The mapping and SNP calling worked well. To reduce the number of missing information in my data set I want CLC to give me not just the SNPs but also all calls that are homozygous to the reference.
I guess that's possible but I do not find the tool/command for it.

Thanks for any advice!

[GenoMax]

Have you contacted CLC tech support about this? They are generally very responsive.

[jwag]

You could export it and filter out those tagged as being the reference allele. I've exported it as an excel sheet and filtered it that way before, when I've used CLC.