Hi,
who can give me some suggestion?
The original data is pairend reads. I first get SAM file using BWA MM , and then BAM file using samtool. How can I get alignments of which first read is mapped to a specific region, such as chromosome 1( 100k-200k).
who can give me some suggestion?
The original data is pairend reads. I first get SAM file using BWA MM , and then BAM file using samtool. How can I get alignments of which first read is mapped to a specific region, such as chromosome 1( 100k-200k).
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