I was wondering, is there a way to compare splice junctions from different data sets?
I ran SpliceMap and MapSplice on different tissue data (liver vs heart) from encode project. I have output in the form of bed files and I want to compare them to see differences in gene expression.
Is there a tool or a general way to go about this?
Thanks!
I ran SpliceMap and MapSplice on different tissue data (liver vs heart) from encode project. I have output in the form of bed files and I want to compare them to see differences in gene expression.
Is there a tool or a general way to go about this?
Thanks!