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Dear All,
I would like to do some investigations in pathway for some genes in different species. I have some candidate genes and also their corresponding gene sequences in different species, and I heard that people can use blast2go to get the GO information of the candidate genes, and then build the pathway by using KEGG which have already collecting the available information about which gene is involved in which pathway. So is that mean the pathway comparison among the candidate genes can be realized in blast2go with KEGG database? Or is there any other software can do this?
Also, I would like to ask is the KEGG the best database for doing this? Is there any other database also include broad information which include Gene ontology, functional experiment results etc.?
Thanks in advance!
Best,
Sadiexiaoyu
I would like to do some investigations in pathway for some genes in different species. I have some candidate genes and also their corresponding gene sequences in different species, and I heard that people can use blast2go to get the GO information of the candidate genes, and then build the pathway by using KEGG which have already collecting the available information about which gene is involved in which pathway. So is that mean the pathway comparison among the candidate genes can be realized in blast2go with KEGG database? Or is there any other software can do this?
Also, I would like to ask is the KEGG the best database for doing this? Is there any other database also include broad information which include Gene ontology, functional experiment results etc.?
Thanks in advance!
Best,
Sadiexiaoyu