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  • morning latte
    Member
    • Jun 2013
    • 91

    #1

    Number of paired-end reads

    Hello experts,

    I have a very simple and stupid question.

    Let's say I have five pairs of Illumina reads (10 reads in total). In this case, should I call it ten PE Illumina reads or five PE Illumina reads? Any help would be appreciated.
  • Brian Bushnell
    Super Moderator
    • Jan 2014
    • 2709

    #2
    10 reads or 5 fragments or 5 pairs. Or 5 clusters, depending on the context.

    Comment

    • morning latte
      Member
      • Jun 2013
      • 91

      #3
      Thanks for your answer!

      Comment

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