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bcftools inastallation problem

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  • #16
    Originally posted by zillur View Post
    Thank you very much for your kind reply. Here is my bash_profile file:# .bash_profile

    # Get the aliases and functions
    if [ -f ~/.bashrc ]; then
    . ~/.bashrc
    fi

    # User specific environment and startup programs

    PATH=$PATH:$HOME/.local/bin:$HOME/bin

    export PATH


    I am not sure which part I need to edit. I have different tools in different directory, like:

    /home/zillur/Desktop/zillur/Tools/bcftools-1.2

    /home/zillur/Desktop/zillur/Tools/samtools-1.2

    /home/zillur/Desktop/zillur/Tools/bowtie2-2.2.5
    If the executables that you want to run are directly under those top level directories then you would need to edit the PATH line like so:
    Code:
    PATH=$PATH:$HOME/.local/bin:$HOME/bin:/home/zillur/Desktop/zillur/Tools/bcftools-1.2:/home/zillur/Desktop/zillur/Tools/samtools-1.2:/home/zillur/Desktop/zillur/Tools/bowtie2-2.2.5
    BTW: what do you see when you do

    Code:
    $ echo $HOME

    Comment


    • #17
      Thank you very much for your kind suggestions. After editing the bash_profile my system is working perfectly and I can run all the tools. Now I want to allow other users to use this tools. How can I manage it.

      Best Regards
      Zillur

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