Originally posted by GenoMax
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Mooc
You can also look at the ongoing mooc "Command line tools for Genomic Data Science" on courseraLeave a comment:
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Keith Bradnam and Ian Korf's "Intro to Unix and Perl" online course is one of the best resources for new users: http://korflab.ucdavis.edu/Unix_and_...ent.html#part1Leave a comment:
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Short intro to Unix utilities for NGS
Hello everyone,
one of our bioinformaticians posted a blog entry describing a few tricks he uses (from the classic Unix toolbox) in the context of NGS data analyses. As a longtime and avid user of Unix myself, I was surprised to learn a few things!
As a reference, the entry is here: http://bioinfo.iric.ca/working-with-large-files/.
Are there any extensive tutorials (or online courses) designed to teach Unix skills to bioinformaticians involved with NGS? I'd love to have a list of recommendations I could use with new students / interns.
Best,
Sébastien
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
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