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  • pingu
    Member
    • Jul 2015
    • 26

    #1

    Barcode splitter

    Hello,
    I am trying to use fastx barcode splitter, but I do not understand if with the option "partial matching " I can allow indel inside the read.
    How does the tool count the mismatches? Does the tool use the Levenshtein distance?
    Thank you very much in advance
    best regards
  • sklages
    Senior Member
    • May 2008
    • 628

    #2
    It uses the hamming distance.

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