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  • Brian Bushnell
    Super Moderator
    • Jan 2014
    • 2709

    #16
    Originally posted by rajeshkmaurya08 View Post
    Hello,
    I am just beginner in Perl,
    I have Two fasta file of different length.
    I would like to align them to find difference in nucleotide postion.

    Output should be like this
    Total length of fasta files
    First reference file: 1253630 bp
    Seconf file: 4523366 bp
    If match 2nd file is same as 1st reference file.
    if not match out put should like this
    Mismatch position of basepair
    A-C 100025
    C-T 600045
    Your question seems to be mostly unrelated to this thread. I suggest you create a new post for it. Also, please spend the time to use correct spelling; at least in my browser, misspelled words are helpfully underlined, so it's not difficult.

    Comment

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