Convert Broad Firehose RSEM to TPM - SEQanswers

You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion

X

mrfox

Senior Member

Join Date: Aug 2010

Posts: 103
- Share
- Tweet
#1

Convert Broad Firehose RSEM to TPM

12-15-2015, 09:13 AM

Hi all,

Does any one have an idea of reliably convert the RSEM expression values from the Broad Institute Firehose TCGA data to TPM?

Or, is there a place to download the TPM value directly?

Many thanks!
Tags: None

Previous template Next

Genetic Variation in Immunogenetics and Antibody Diversity

by seqadmin

The field of immunogenetics explores how genetic variations influence immune responses and susceptibility to disease. In a recent SEQanswers webinar, Oscar Rodriguez, Ph.D., Postdoctoral Researcher at the University of Louisville, and Ruben Martínez Barricarte, Ph.D., Assistant Professor of Medicine at Vanderbilt University, shared recent advancements in immunogenetics. This article discusses their research on genetic variation in antibody loci, antibody production processes,...
- Channel: Articles
11-06-2024, 07:24 PM
Choosing Between NGS and qPCR

by seqadmin

Next-generation sequencing (NGS) and quantitative polymerase chain reaction (qPCR) are essential techniques for investigating the genome, transcriptome, and epigenome. In many cases, choosing the appropriate technique is straightforward, but in others, it can be more challenging to determine the most effective option. A simple distinction is that smaller, more focused projects are typically better suited for qPCR, while larger, more complex datasets benefit from NGS. However,...
- Channel: Articles
10-18-2024, 07:11 AM

	Topics		Statistics	Last Post
	ASHG 2024 Highlights – Part Two by seqadmin Started by seqadmin, Today, 11:09 AM		0 responses 22 views 0 likes	Last Post by seqadmin Today, 11:09 AM
	ASHG 2024 Highlights – Part One by seqadmin Started by seqadmin, Today, 06:13 AM		0 responses 19 views 0 likes	Last Post by seqadmin Today, 06:13 AM
	Seq-Scope Expands Possibilities for High-Resolution Gene Expression Analysis by seqadmin Started by seqadmin, 11-01-2024, 06:09 AM		0 responses 30 views 0 likes	Last Post by seqadmin 11-01-2024, 06:09 AM
	New Model Aims to Explain Polygenic Diseases by Connecting Genomic Mutations and Regulatory Networks by seqadmin Started by seqadmin, 10-30-2024, 05:31 AM		0 responses 21 views 0 likes	Last Post by seqadmin 10-30-2024, 05:31 AM

Working...

X