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zhanghao

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How to assemible pacbio and 454 contif?

01-04-2016, 08:16 AM

I have sequenced a bacteral using 454 and now get many 454 contig (format is xxxx.phd.1). Now I use pacbio to sequence it again. I want to assemble them together. I do not have the 454 raw data and just have the assembled contigs. So I do not think Celera Assembler (CA) can do it. How should I do? Which software should I use?

Thank You!!!
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