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  • gfmgfm
    Member
    • Jun 2010
    • 64

    #1

    wig files

    Hello,
    I am new in the field of NGS. I did a small RNA SEQ experiment. I have a blast output of tags and I want to create wig files for IGV. I looked for instructions on creating such files. Does anyone has a link to such instructions or can give any tips?
    Thanks.
  • dawe
    Senior Member
    • Apr 2009
    • 258

    #2
    Hi, you can find wig specs here. After that just load it into IGV

    d

    Comment

    • adamdeluca
      Member
      • Jul 2010
      • 95

      #3
      You can also create a bed graph file

      Chr start stop value

      And convert it to wig/bigwig with the utilities provided by ucsc

      Comment

      • gfmgfm
        Member
        • Jun 2010
        • 64

        #4
        Thanks a lot.

        Comment

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