This may seem like an obvious question. I have two groups of DNA sequences (e.g. pop1 and pop2) for many loci and I want to know if any have fixed differences (e.g. pop1 has all A and pop2 has all G at a give site). Is there any open source code or software (besides DNAsp) that can do this for me? Any suggestions would be greatly appreciated.
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Last edited by juanc; 03-10-2016, 05:08 PM.
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