Where to find prokaryotic RNA-Seq data?

[aprice67]

Hi,

I'm currently working on a project comparing different bacterial strains. I want to confirm my findings by applying my methods to an additional dataset. What I need are two RNA-seq data sets (or more) for different strains of any bacteria that have a reference genome available. For instance, I have vibrio vulnificus CMCP6 and vibrio vulnificus YJ016. It would be nice to have, for instance, two different strains of e.coli that have reference genomes available.

Where can I find this kind of data publicly availalble? I've been looking around genbank and SRA, but havn't done so well. I would appreciate any search tips or advice on where to find some of this sort of data. Thanks very much in advance!

[GenoMax]

EBI_ENA: http://www.ebi.ac.uk/ena/data/search...rio+vulnificus (find read/run in the list).

NCBI-SRA: http://www.ncbi.nlm.nih.gov/sra/?term=vibrio+vulnificus (click on RNA in left pane)

Edit: Not sure if you are saying that you have the Vibrio data and would like others. But ENA/SRA would be the places to look at.

[aprice67]

Thanks very much! This is much more like what I was hoping for.