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  • ac91
    Member
    • Aug 2015
    • 13
    #1

    GUIDANCE (software) / BioPerl - help

    Hi,

    I´m running GUIDANCE for some alignments (datatype = codon) and I have some NNN in the middle of the sequences. The software seems to assume these NNN as stop codons.
    NOTE: GUIDANCE uses BIOPERL

    "EXIT on error:
    A Stop codon ,"NNN", was found in sequence in position . Please verify that there are no internal stop-codons in your sequences."

    Someone already had the same problem? Can be a problem of BIOPERL?

    Thanks so much!!
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