Hi,
I want to compute the distribution of multi-mapped reads in BWA BAM file. Namely, I want to know the number of times each multi-mapped read appear in the bam file. This can be then used to construct a table like this:
<=10 times #reads
>10 & <20 #reads
and so on ..
I am not sure how to do that. Can anyone try to help?. Thank you.
-Eteleeb
I want to compute the distribution of multi-mapped reads in BWA BAM file. Namely, I want to know the number of times each multi-mapped read appear in the bam file. This can be then used to construct a table like this:
<=10 times #reads
>10 & <20 #reads
and so on ..
I am not sure how to do that. Can anyone try to help?. Thank you.
-Eteleeb
