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  • RDP: what does (T) mean in sequence identifier?

    Hi There,
    I'm downloading sequences from RDP for genera, and species I'm interested in. Upon downloading I see few sequence identifiers have (T) in them. Example:

    >S002232093 Dialister pneumosintes (T)
    >S000446390 Dialister micraerophilus (T)

    I'm unable to find its information in Help page, or RDP wiki.

    Any pointers would be great.
    Last edited by bio_informatics; 08-02-2016, 06:10 AM.
    Bioinformaticscally calm

  • #2
    Fairly sure that (T) stands for type strain - if you filter, selecting only type strains, all you see are sequences with a (T) subscript.

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    • #3
      Originally posted by VinceM View Post
      Fairly sure that (T) stands for type strain - if you filter, selecting only type strains, all you see are sequences with a (T) subscript.
      Ah, I see. In the beginning from the options:
      Strain - type, non type, both

      I selected both in radio button.

      Thank you very much for your prompt reply, and helping me with this. :-)
      Last edited by bio_informatics; 08-02-2016, 06:51 AM.
      Bioinformaticscally calm

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