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  • A MH Tree Construction Problem from MEGA7 Win-GUI and Linux-CC

    Hi All,

    I tried to apply MEGA 7 Win7-GUI and Other Linux-CC versions for MH Tree construction, but there were some unexpected results. The data I used were 6 Lactobacillus genome downloaded from NCBI. 6 Lactobacillus were aligned by ClustalW in MEGA7, and exported as .meg file format. After that, MH Trees constructed by Win7-GUI are shown as Figure 12 and by Other Linux-CC are shown as Figure 14. Unexpectedly, I got two different MH trees which were constructed by the same alignment file (.meg file) and same default parameters. I would appreciate if you give me some suggestions about MEGA7 MH Tree construction. Cheers!

    Best regards,
    Mylon


    Figure 12 in attachment

    Figure 14 in attachment
    Attached Files

  • #2
    Sorry guys, it should be ML (Maximum Likelihood) Tree !

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