Hi all,
After blast my query against my database (compose by contigs), I've tried to see the homologies in the Artemis Comparison Tool (ACT) by loading the query, the blastout (doing blast with -m 8 flag) and my original database; but the problem is that this database is quite large (200Mb) and it doesn't load into ACT.
So I'm thinking how to filter the database and take only the contigs that have some homologies. Any ideas?? Maybe a script or any program?
Thanks!
After blast my query against my database (compose by contigs), I've tried to see the homologies in the Artemis Comparison Tool (ACT) by loading the query, the blastout (doing blast with -m 8 flag) and my original database; but the problem is that this database is quite large (200Mb) and it doesn't load into ACT.
So I'm thinking how to filter the database and take only the contigs that have some homologies. Any ideas?? Maybe a script or any program?
Thanks!
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