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  • LacquerHead
    Member
    • Nov 2015
    • 31

    #1

    Normalizing read coverage across replicates

    Hi all, wondering what the preferred way to normalize read coverage across ChIP-seq replicates before potentially merging/intersecting them for downstream analysis? Thanks!

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    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
    by SEQadmin2





    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
    10-30-2026, 06:46 AM

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